Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NpcdF8VQB8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NpcdF8VQB8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.33■□□□□ 0.37
NpcdF8VQB8 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.33■□□□□ 0.36
NpcdF8VQB8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.33■□□□□ 0.36
NpcdF8VQB8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.33■□□□□ 0.36
NpcdF8VQB8 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.33■□□□□ 0.36
NpcdF8VQB8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.33■□□□□ 0.36
NpcdF8VQB8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NpcdF8VQB8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.32■□□□□ 0.36
NpcdF8VQB8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.32■□□□□ 0.36
NpcdF8VQB8 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.32■□□□□ 0.36
NpcdF8VQB8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.32■□□□□ 0.36
NpcdF8VQB8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.31■□□□□ 0.36
NpcdF8VQB8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.31■□□□□ 0.36
NpcdF8VQB8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.31■□□□□ 0.36
NpcdF8VQB8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.31■□□□□ 0.36
NpcdF8VQB8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.31■□□□□ 0.36
NpcdF8VQB8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NpcdF8VQB8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NpcdF8VQB8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms