Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdh9F8VPK8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Gm45098-201ENSMUST00000207179 657 ntBASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh9F8VPK8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh9F8VPK8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Gm27301-201ENSMUST00000184012 127 ntBASIC14.8□□□□□ -0.04
Pcdh9F8VPK8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms