Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Gm13823-201ENSMUST00000119930 345 ntBASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Gm14767-201ENSMUST00000121559 586 ntBASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Gm27533-201ENSMUST00000183800 152 ntBASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.47□□□□□ -0.25
Pcdh17E9PXF0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Gm13464-201ENSMUST00000119418 935 ntBASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh17E9PXF0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh17E9PXF0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh17E9PXF0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh17E9PXF0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh17E9PXF0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdh17E9PXF0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh17E9PXF0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Gm9719-201ENSMUST00000162765 543 ntBASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Gm27680-201ENSMUST00000184192 160 ntBASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Gm9063-201ENSMUST00000223299 582 ntBASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh17E9PXF0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh17E9PXF0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms