Protein–RNA interactions for Protein: B1AWZ3

Nipsnap3a, Nipsnap homolog 3A, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3aB1AWZ3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.18□□□□□ -0.14
Nipsnap3aB1AWZ3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm11594-201ENSMUST00000122313 162 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm37935-201ENSMUST00000192012 982 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap3aB1AWZ3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Gm2213-201ENSMUST00000197485 688 ntBASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap3aB1AWZ3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms