Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav12d-1A0N8R0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav12d-1A0N8R0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-1A0N8R0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav12d-1A0N8R0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm9182-201ENSMUST00000217829 639 ntBASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav12d-1A0N8R0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Gm4899-201ENSMUST00000178708 719 ntBASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Gm6550-201ENSMUST00000187574 993 ntBASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav12d-1A0N8R0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-1A0N8R0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms