Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm11594-201ENSMUST00000122313 162 ntBASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lnp1A0A1B0GSK3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lnp1A0A1B0GSK3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lnp1A0A1B0GSK3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Gm6973-201ENSMUST00000117080 721 ntBASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Gm11025-201ENSMUST00000140773 466 ntBASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lnp1A0A1B0GSK3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms