Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Gm15358-201ENSMUST00000119249 520 ntBASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7n-4A0A075B620 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Gm7889-201ENSMUST00000185591 958 ntBASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7n-4A0A075B620 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7n-4A0A075B620 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms