Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.28□□□□□ -0.6
CcsQ9WU84 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.28□□□□□ -0.6
CcsQ9WU84 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CcsQ9WU84 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.27□□□□□ -0.6
CcsQ9WU84 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.27□□□□□ -0.6
CcsQ9WU84 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CcsQ9WU84 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CcsQ9WU84 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.27□□□□□ -0.61
CcsQ9WU84 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
CcsQ9WU84 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.27□□□□□ -0.61
CcsQ9WU84 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Gm27867-201ENSMUST00000184778 125 ntBASIC11.27□□□□□ -0.61
CcsQ9WU84 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Rps4l-201ENSMUST00000071745 943 ntBASIC11.27□□□□□ -0.61
CcsQ9WU84 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.27□□□□□ -0.61
CcsQ9WU84 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.27□□□□□ -0.61
CcsQ9WU84 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CcsQ9WU84 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcsQ9WU84 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
CcsQ9WU84 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CcsQ9WU84 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcsQ9WU84 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms