Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Olfr582-201ENSMUST00000098212 960 ntBASIC16.91■□□□□ 0.3
Scn11aQ9R053 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.91■□□□□ 0.3
Scn11aQ9R053 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn11aQ9R053 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Gm29741-201ENSMUST00000192667 421 ntBASIC16.9■□□□□ 0.3
Scn11aQ9R053 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.9■□□□□ 0.3
Scn11aQ9R053 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.9■□□□□ 0.3
Scn11aQ9R053 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.9■□□□□ 0.3
Scn11aQ9R053 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn11aQ9R053 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.89■□□□□ 0.3
Scn11aQ9R053 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn11aQ9R053 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Scn11aQ9R053 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Scn11aQ9R053 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn11aQ9R053 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.89■□□□□ 0.3
Scn11aQ9R053 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn11aQ9R053 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.89■□□□□ 0.29
Scn11aQ9R053 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.89■□□□□ 0.29
Scn11aQ9R053 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.89■□□□□ 0.29
Scn11aQ9R053 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn11aQ9R053 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Gm8584-201ENSMUST00000171982 758 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Gm45841-201ENSMUST00000207700 164 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.88■□□□□ 0.29
Scn11aQ9R053 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn11aQ9R053 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms