Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clcf1Q9QZM3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clcf1Q9QZM3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcf1Q9QZM3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcf1Q9QZM3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcf1Q9QZM3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clcf1Q9QZM3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Gm11543-201ENSMUST00000120758 370 ntBASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clcf1Q9QZM3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Gm2810-201ENSMUST00000118681 990 ntBASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Gm15483-201ENSMUST00000120338 456 ntBASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clcf1Q9QZM3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clcf1Q9QZM3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clcf1Q9QZM3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clcf1Q9QZM3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clcf1Q9QZM3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms