Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Gm29707-201ENSMUST00000196325 491 ntBASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco4Q9JIS3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Pck2-205ENSMUST00000226352 2784 ntBASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco4Q9JIS3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco4Q9JIS3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms