Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.93□□□□□ -0.18
Ube4bQ9ES00 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ube4bQ9ES00 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Gm14722-201ENSMUST00000118943 689 ntBASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ube4bQ9ES00 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Rprl3-201ENSMUST00000157400 290 ntBASIC13.91□□□□□ -0.18
Ube4bQ9ES00 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.91□□□□□ -0.18
Ube4bQ9ES00 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ube4bQ9ES00 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube4bQ9ES00 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms