Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gm29127-201ENSMUST00000188304 517 ntBASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-4Q9EQM3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-4Q9EQM3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Gm5370-201ENSMUST00000187187 574 ntBASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-4Q9EQM3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm5187-201ENSMUST00000117317 991 ntBASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm27243-201ENSMUST00000183964 521 ntBASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Gm40466-201ENSMUST00000212174 422 ntBASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-4Q9EQM3 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms