Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cpsf1Q9EPU4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cpsf1Q9EPU4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm18624-201ENSMUST00000220966 658 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Mir497b-201ENSMUST00000093601 125 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm38102-201ENSMUST00000192791 1935 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm28760-201ENSMUST00000185995 736 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm18018-201ENSMUST00000198273 408 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpsf1Q9EPU4 Gm42690-201ENSMUST00000197921 1836 ntBASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpsf1Q9EPU4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Gm9347-201ENSMUST00000211473 1607 ntBASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 CT030704.2-201ENSMUST00000228887 494 ntBASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cpsf1Q9EPU4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf1Q9EPU4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms