Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmgn3Q9DCB1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Gm13836-201ENSMUST00000121159 501 ntBASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmgn3Q9DCB1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Acot6-202ENSMUST00000222921 3622 ntBASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn3Q9DCB1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn3Q9DCB1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms