Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdc40Q9DC48 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
Cdc40Q9DC48 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm22175-201ENSMUST00000175007 78 ntBASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdc40Q9DC48 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Gm27430-201ENSMUST00000184585 107 ntBASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Gm44333-201ENSMUST00000197168 107 ntBASIC13.44□□□□□ -0.26
Cdc40Q9DC48 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.44□□□□□ -0.26
Cdc40Q9DC48 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdc40Q9DC48 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdc40Q9DC48 Gm10253-201ENSMUST00000194270 940 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms