Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Gm12585-201ENSMUST00000117307 290 ntBASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.15□□□□□ -0.14
Rrp8Q9DB85 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.15□□□□□ -0.14
Rrp8Q9DB85 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Gm15824-201ENSMUST00000119516 955 ntBASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rrp8Q9DB85 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp8Q9DB85 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms