Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Gm14701-201ENSMUST00000117156 348 ntBASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Mir6990-201ENSMUST00000183724 91 ntBASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp2aQ9DB34 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Gm43474-201ENSMUST00000196415 774 ntBASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2aQ9DB34 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2aQ9DB34 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm8749-201ENSMUST00000117737 331 ntBASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm5479-201ENSMUST00000160578 435 ntBASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Gm45098-201ENSMUST00000207179 657 ntBASIC15.1■□□□□ 0.01
Chmp2aQ9DB34 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms