Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ssmem1Q9D9Y8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssmem1Q9D9Y8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssmem1Q9D9Y8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssmem1Q9D9Y8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssmem1Q9D9Y8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssmem1Q9D9Y8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Gm6415-201ENSMUST00000118488 348 ntBASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Mir6956-201ENSMUST00000183598 62 ntBASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssmem1Q9D9Y8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssmem1Q9D9Y8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssmem1Q9D9Y8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms