Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Gm23547-201ENSMUST00000158210 271 ntBASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Gm10253-201ENSMUST00000194270 940 ntBASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.7□□□□□ -0.38
Tmem54Q9D7S1 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tmem54Q9D7S1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gm12134-201ENSMUST00000122109 520 ntBASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gm10275-202ENSMUST00000168697 495 ntBASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gm10275-201ENSMUST00000092620 635 ntBASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tmem54Q9D7S1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms