Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4cQ9D7F7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4cQ9D7F7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Gm18195-201ENSMUST00000207604 706 ntBASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4cQ9D7F7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4cQ9D7F7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4cQ9D7F7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4cQ9D7F7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4cQ9D7F7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4cQ9D7F7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp4cQ9D7F7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms