Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sft2d3Q9CSV6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm13365-201ENSMUST00000121188 973 ntBASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sft2d3Q9CSV6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Gm44335-201ENSMUST00000196879 141 ntBASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Gm44297-201ENSMUST00000198304 141 ntBASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Gm44346-201ENSMUST00000198851 141 ntBASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sft2d3Q9CSV6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sft2d3Q9CSV6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms