Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm8652-201ENSMUST00000181363 964 ntBASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm43179-201ENSMUST00000198797 275 ntBASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cldnd1Q9CQX5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm15429-201ENSMUST00000151268 798 ntBASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm27572-201ENSMUST00000183702 255 ntBASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm8463-201ENSMUST00000208573 613 ntBASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm6091-201ENSMUST00000098307 165 ntBASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldnd1Q9CQX5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gm7287-201ENSMUST00000205267 602 ntBASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gm7561-201ENSMUST00000211203 886 ntBASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldnd1Q9CQX5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldnd1Q9CQX5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Cldnd1Q9CQX5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldnd1Q9CQX5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms