Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gm7862-201ENSMUST00000121461 292 ntBASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Ska1Q9CPV1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Ska1Q9CPV1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Gm5682-201ENSMUST00000173402 505 ntBASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Gm10819-201ENSMUST00000099988 561 ntBASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ska1Q9CPV1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms