Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Bhlhe41Q99PV5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Gm15483-201ENSMUST00000120338 456 ntBASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Olfr286-202ENSMUST00000205305 969 ntBASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bhlhe41Q99PV5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bhlhe41Q99PV5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Gm45612-201ENSMUST00000211320 160 ntBASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bhlhe41Q99PV5 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bhlhe41Q99PV5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms