Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.18□□□□□ -0.14
Trim16Q99PP9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.18□□□□□ -0.14
Trim16Q99PP9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.18□□□□□ -0.14
Trim16Q99PP9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.18□□□□□ -0.14
Trim16Q99PP9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim16Q99PP9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim16Q99PP9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.17□□□□□ -0.14
Trim16Q99PP9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.17□□□□□ -0.14
Trim16Q99PP9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.17□□□□□ -0.14
Trim16Q99PP9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.17□□□□□ -0.14
Trim16Q99PP9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Efs-202ENSMUST00000227037 2540 ntBASIC14.17□□□□□ -0.14
Trim16Q99PP9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.17□□□□□ -0.14
Trim16Q99PP9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim16Q99PP9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim16Q99PP9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim16Q99PP9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms