Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim33Q99PP7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm14822-201ENSMUST00000122247 291 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm24513-201ENSMUST00000174964 138 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm27397-201ENSMUST00000184997 107 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm37935-201ENSMUST00000192012 982 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.38□□□□□ -0.11
Trim33Q99PP7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim33Q99PP7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Efs-202ENSMUST00000227037 2540 ntBASIC14.37□□□□□ -0.11
Trim33Q99PP7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.37□□□□□ -0.11
Trim33Q99PP7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.37□□□□□ -0.11
Trim33Q99PP7 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.37□□□□□ -0.11
Trim33Q99PP7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.37□□□□□ -0.11
Trim33Q99PP7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim33Q99PP7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.36□□□□□ -0.11
Trim33Q99PP7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.36□□□□□ -0.11
Trim33Q99PP7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.36□□□□□ -0.11
Trim33Q99PP7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim33Q99PP7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.36□□□□□ -0.11
Trim33Q99PP7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms