Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Gm15429-201ENSMUST00000151268 798 ntBASIC17.75■□□□□ 0.43
RtcbQ99LF4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Gm7287-201ENSMUST00000205267 602 ntBASIC17.75■□□□□ 0.43
RtcbQ99LF4 Gm18905-201ENSMUST00000205454 928 ntBASIC17.75■□□□□ 0.43
RtcbQ99LF4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.75■□□□□ 0.43
RtcbQ99LF4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RtcbQ99LF4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.75■□□□□ 0.43
RtcbQ99LF4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Mir1247-201ENSMUST00000116706 82 ntBASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm8652-201ENSMUST00000181363 964 ntBASIC17.74■□□□□ 0.43
RtcbQ99LF4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm27731-201ENSMUST00000185192 107 ntBASIC17.74■□□□□ 0.43
RtcbQ99LF4 Gm7561-201ENSMUST00000211203 886 ntBASIC17.74■□□□□ 0.43
RtcbQ99LF4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RtcbQ99LF4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.73■□□□□ 0.43
RtcbQ99LF4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.73■□□□□ 0.43
RtcbQ99LF4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RtcbQ99LF4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RtcbQ99LF4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms