Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vmp1Q99KU0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Gm5177-201ENSMUST00000183092 997 ntBASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vmp1Q99KU0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Thap2-203ENSMUST00000218989 527 ntBASIC13.97□□□□□ -0.17
Vmp1Q99KU0 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vmp1Q99KU0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Gm27301-201ENSMUST00000184012 127 ntBASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Gm2756-201ENSMUST00000195851 400 ntBASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Gm44492-201ENSMUST00000197012 141 ntBASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Vmp1Q99KU0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vmp1Q99KU0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.96□□□□□ -0.18
Vmp1Q99KU0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vmp1Q99KU0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vmp1Q99KU0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vmp1Q99KU0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vmp1Q99KU0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms