Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm44335-201ENSMUST00000196879 141 ntBASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm44297-201ENSMUST00000198304 141 ntBASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm44346-201ENSMUST00000198851 141 ntBASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha3Q91Y16 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Gm14701-201ENSMUST00000117156 348 ntBASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Gm43125-201ENSMUST00000201724 730 ntBASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha3Q91Y16 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm25287-201ENSMUST00000103846 110 ntBASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm22918-201ENSMUST00000103855 110 ntBASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm9726-201ENSMUST00000180321 678 ntBASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm5312-201ENSMUST00000203728 547 ntBASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha3Q91Y16 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms