Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Gm7441-201ENSMUST00000220697 1074 ntBASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb20Q91XZ9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb20Q91XZ9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm6027-201ENSMUST00000121467 756 ntBASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm25295-201ENSMUST00000122794 306 ntBASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm43474-201ENSMUST00000196415 774 ntBASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm42734-201ENSMUST00000201656 878 ntBASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm43125-201ENSMUST00000201724 730 ntBASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb20Q91XZ9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm15483-201ENSMUST00000120338 456 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm25843-201ENSMUST00000122582 314 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm16285-201ENSMUST00000162999 347 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 AC140368.1-202ENSMUST00000226131 658 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb20Q91XZ9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms