Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Gm10060-201ENSMUST00000212002 111 ntBASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb3Q91XZ7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.52□□□□□ -0.08
Pcdhb3Q91XZ7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.52□□□□□ -0.09
Pcdhb3Q91XZ7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm23958-201ENSMUST00000157207 105 ntBASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm4535-201ENSMUST00000182274 558 ntBASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm10355-201ENSMUST00000097146 517 ntBASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb3Q91XZ7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb3Q91XZ7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms