Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb4Q91XZ6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Gm13597-201ENSMUST00000121239 375 ntBASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Gm23547-201ENSMUST00000158210 271 ntBASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Mzt1-203ENSMUST00000227948 952 ntBASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb4Q91XZ6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gm18733-201ENSMUST00000173950 856 ntBASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gm2272-201ENSMUST00000194903 582 ntBASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb4Q91XZ6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb4Q91XZ6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms