Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga11Q91XY8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Gm13464-201ENSMUST00000119418 935 ntBASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Gm9726-201ENSMUST00000180321 678 ntBASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga11Q91XY8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhga11Q91XY8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Gm16026-204ENSMUST00000162652 683 ntBASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhga11Q91XY8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms