Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.55■□□□□ 0.24
Trex1Q91XB0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Gm12882-201ENSMUST00000121696 517 ntBASIC16.54■□□□□ 0.24
Trex1Q91XB0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.54■□□□□ 0.24
Trex1Q91XB0 Gm18624-201ENSMUST00000220966 658 ntBASIC16.54■□□□□ 0.24
Trex1Q91XB0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Carlr-201ENSMUST00000181515 2574 ntBASIC16.54■□□□□ 0.24
Trex1Q91XB0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trex1Q91XB0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.53■□□□□ 0.24
Trex1Q91XB0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.53■□□□□ 0.24
Trex1Q91XB0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.53■□□□□ 0.24
Trex1Q91XB0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Efs-202ENSMUST00000227037 2540 ntBASIC16.52■□□□□ 0.24
Trex1Q91XB0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.52■□□□□ 0.24
Trex1Q91XB0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.52■□□□□ 0.24
Trex1Q91XB0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Gm45384-201ENSMUST00000210451 277 ntBASIC16.52■□□□□ 0.24
Trex1Q91XB0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.52■□□□□ 0.24
Trex1Q91XB0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trex1Q91XB0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trex1Q91XB0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trex1Q91XB0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trex1Q91XB0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trex1Q91XB0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trex1Q91XB0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trex1Q91XB0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Gm14127-201ENSMUST00000117906 678 ntBASIC16.51■□□□□ 0.23
Trex1Q91XB0 Gm15957-201ENSMUST00000118893 974 ntBASIC16.51■□□□□ 0.23
Trex1Q91XB0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.51■□□□□ 0.23
Trex1Q91XB0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trex1Q91XB0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms