Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.64■□□□□ 0.25
Ddx41Q91VN6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gm15693-201ENSMUST00000120470 637 ntBASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Celf4-206ENSMUST00000224553 1729 ntBASIC16.64■□□□□ 0.25
Ddx41Q91VN6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx41Q91VN6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Gm38225-201ENSMUST00000194001 393 ntBASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx41Q91VN6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx41Q91VN6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx41Q91VN6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms