Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Odf4Q8VI88 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Odf4Q8VI88 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Odf4Q8VI88 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Odf4Q8VI88 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Odf4Q8VI88 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Odf4Q8VI88 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Gm44492-201ENSMUST00000197012 141 ntBASIC13.01□□□□□ -0.33
Odf4Q8VI88 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.01□□□□□ -0.33
Odf4Q8VI88 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Odf4Q8VI88 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13□□□□□ -0.33
Odf4Q8VI88 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13□□□□□ -0.33
Odf4Q8VI88 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13□□□□□ -0.33
Odf4Q8VI88 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13□□□□□ -0.33
Odf4Q8VI88 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Gm45003-201ENSMUST00000205875 2158 ntBASIC13□□□□□ -0.33
Odf4Q8VI88 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Odf4Q8VI88 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Odf4Q8VI88 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Odf4Q8VI88 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.99□□□□□ -0.33
Odf4Q8VI88 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.99□□□□□ -0.33
Odf4Q8VI88 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Odf4Q8VI88 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms