Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Gm21362-201ENSMUST00000194272 928 ntBASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rpa1Q8VEE4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Gm27646-201ENSMUST00000183989 110 ntBASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rpa1Q8VEE4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rpa1Q8VEE4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms