Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.69□□□□□ -0.22
Ndc1Q8VCB1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Gm29541-201ENSMUST00000191351 678 ntBASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Gm38294-201ENSMUST00000192831 381 ntBASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ndc1Q8VCB1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm13223-201ENSMUST00000118609 747 ntBASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm17837-201ENSMUST00000186435 985 ntBASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndc1Q8VCB1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndc1Q8VCB1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms