Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm14140-201ENSMUST00000119999 995 ntBASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Gm27741-201ENSMUST00000185060 237 ntBASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps39Q8R5L3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps39Q8R5L3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Gm5177-201ENSMUST00000183092 997 ntBASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps39Q8R5L3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps39Q8R5L3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Gm27301-201ENSMUST00000184012 127 ntBASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps39Q8R5L3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms