Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp7Q8R1T1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp7Q8R1T1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chmp7Q8R1T1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp7Q8R1T1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp7Q8R1T1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chmp7Q8R1T1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Mir6392-201ENSMUST00000184924 108 ntBASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chmp7Q8R1T1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Gm12882-201ENSMUST00000121696 517 ntBASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.44■□□□□ 0.54
Chmp7Q8R1T1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms