Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Gm13418-201ENSMUST00000119097 944 ntBASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Nudcd3Q8R1N4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Gm5682-201ENSMUST00000173402 505 ntBASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Gm7787-201ENSMUST00000216858 688 ntBASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nudcd3Q8R1N4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd3Q8R1N4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Nudcd3Q8R1N4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd3Q8R1N4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.46□□□□□ -0.09
Nudcd3Q8R1N4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd3Q8R1N4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nudcd3Q8R1N4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms