Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Gm13464-201ENSMUST00000119418 935 ntBASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Gm18959-201ENSMUST00000208954 655 ntBASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Gm18263-201ENSMUST00000220846 1928 ntBASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pdlim2Q8R1G6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.57■□□□□ 0.24
Pdlim2Q8R1G6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gm15794-201ENSMUST00000120182 631 ntBASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim2Q8R1G6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Gm5422-201ENSMUST00000050717 2721 ntBASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim2Q8R1G6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms