Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrrtm1Q8K377 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Gm27357-201ENSMUST00000183754 135 ntBASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lrrtm1Q8K377 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Gm11780-201ENSMUST00000136880 516 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Mir7071-201ENSMUST00000184847 69 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrrtm1Q8K377 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lrrtm1Q8K377 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms