Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syne4Q8CII8 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.28■□□□□ 0.2
Syne4Q8CII8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.28■□□□□ 0.2
Syne4Q8CII8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Gm15957-201ENSMUST00000118893 974 ntBASIC16.28■□□□□ 0.2
Syne4Q8CII8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Gm27486-201ENSMUST00000184923 80 ntBASIC16.28■□□□□ 0.2
Syne4Q8CII8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.28■□□□□ 0.2
Syne4Q8CII8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne4Q8CII8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne4Q8CII8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Syne4Q8CII8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.27■□□□□ 0.2
Syne4Q8CII8 Gm5425-201ENSMUST00000214125 459 ntBASIC16.27■□□□□ 0.2
Syne4Q8CII8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne4Q8CII8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Syne4Q8CII8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne4Q8CII8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syne4Q8CII8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Syne4Q8CII8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syne4Q8CII8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.27■□□□□ 0.19
Syne4Q8CII8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syne4Q8CII8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Syne4Q8CII8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Gm13226-201ENSMUST00000117838 404 ntBASIC16.26■□□□□ 0.19
Syne4Q8CII8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syne4Q8CII8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.26■□□□□ 0.19
Syne4Q8CII8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syne4Q8CII8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms