Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lrif1Q8CDD9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrif1Q8CDD9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrif1Q8CDD9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms