Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm24543-201ENSMUST00000103867 82 ntBASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Shd-206ENSMUST00000225145 998 ntBASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf31Q8CCF0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.83■□□□□ 0.13
Prpf31Q8CCF0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Gm27631-201ENSMUST00000184163 466 ntBASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf31Q8CCF0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Gm6222-201ENSMUST00000120787 396 ntBASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf31Q8CCF0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf31Q8CCF0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms