Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps9d1Q8C190 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps9d1Q8C190 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm5364-201ENSMUST00000216789 889 ntBASIC13.56□□□□□ -0.24
Vps9d1Q8C190 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps9d1Q8C190 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms