Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Gm11745-201ENSMUST00000121669 448 ntBASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trub1Q8C0D0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.94□□□□□ -0.02
Trub1Q8C0D0 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gm10275-202ENSMUST00000168697 495 ntBASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gm10275-201ENSMUST00000092620 635 ntBASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trub1Q8C0D0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Gm2810-201ENSMUST00000118681 990 ntBASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Gm18737-201ENSMUST00000173594 937 ntBASIC14.92□□□□□ -0.02
Trub1Q8C0D0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.92□□□□□ -0.02
Trub1Q8C0D0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms