Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne3Q8BT60 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Gm2651-201ENSMUST00000203560 838 ntBASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.01□□□□□ -0.17
Cpne3Q8BT60 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne3Q8BT60 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Gm8096-201ENSMUST00000209921 1591 ntBASIC14□□□□□ -0.17
Cpne3Q8BT60 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Gm9726-201ENSMUST00000180321 678 ntBASIC14□□□□□ -0.17
Cpne3Q8BT60 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne3Q8BT60 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne3Q8BT60 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms